FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011831

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011831
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences947464
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAACGC1700.003110909421.3019241
CTCACTT4450.004782949611.3929391
CTTAAAT7201.5472363E-410.0592411
CGTACAG6350.00637169749.1101545
CTTGGAT6500.00761785828.9140351
CTTCCGA9750.0031549137.4283631
CTACAAT10100.00445068267.1709451
CTTCAAC12657.3463476E-46.8705021
CTTTCAC11600.00223153886.86803341
TGATTTG13000.007462956.1186954
CATTGAT15300.0062219345.68051341
ATTTTGT18900.00194010215.36492871
CTTCCAG19050.00214283175.32268571
Produced by FastQC (version 0.11.5)