FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011839

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011839
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1128819
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAATCT3000.00514082714.306631
CTCCAAT7351.8351704E-510.7056421
GAGGCAC5700.0029708639.9930475
GTTTTAA12800.0071126496.147381
GCTTCAT17950.00716643045.1806741
ATTTCAT24253.6467472E-45.01469561
Produced by FastQC (version 0.11.5)