FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011856

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011856
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences766828
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTTAA3252.3532617E-517.7086625
CACACGT2900.003950468314.8844387
CACGTCT3150.006837798713.7031339
ACACGTC3250.0084077513.2814978
GCACACG4453.428686E-412.9332926
AGCACAC4850.00952995710.3833025
CAATTTT11602.793568E-47.4748751
GTTTTAT11550.00218414356.88163041
CAAAGGA14850.00458296535.8389591
TTGATAT15850.0098677525.44738153
Produced by FastQC (version 0.11.5)