FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011859

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011859
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences518735
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACTAGG250.001028406885.017327
CACGTCT2206.888427E-419.3221179
AAGCTAA2350.001073081518.088795
GAGCACA3458.324257E-414.3749084
GATATAC5850.00383175289.6885825
CTTTTTT17051.4074485E-56.66002851
Produced by FastQC (version 0.11.5)