FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011865

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011865
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1332063
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAGCC350.00359262562.029611
CACCCGT4650.006934759710.8388855
CCCCATT7853.7224297E-49.2188381
CTCAAGG8000.00451835768.1413871
CTAAAAG9850.0035156587.3469931
CCCGCAG13401.8674684E-47.02076441
CTCCAAT11600.00225235826.8624711
ATCCAAT13350.00136748116.5049781
CTTTGAA22452.4046767E-66.12467581
CTTTACT13250.0090223066.00789931
CTCGCCG14800.004346435.86766621
CACAGAT17356.630406E-45.83948331
AGAATCT18903.3885209E-45.71480753
CTTTTGG15950.0099378175.44460541
CATTTAC20057.0258044E-45.4140561
CTTCAAT21452.977468E-45.39807031
GTATAAT19400.00272280965.22242451
Produced by FastQC (version 0.11.5)