FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011882

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011882
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2384409
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCCGA14909.127825E-56.8075081
CCCTGAC13953.0176927E-46.75173661
TCGAGTT10700.0080643636.74544572
CTTCAAC27307.174094E-96.36934761
CTAATTT17451.0488298E-46.2279081
CCCGATT15550.00742660745.59109971
CCCAAAG18250.00124476335.55791041
GTCACGG15700.008255445.53768161
CTCTGAT17050.003373795.52414851
CACAGAG17700.0052439535.3212841
ACAGAGT17700.00548756365.30074833
GTTCAAA28051.7875098E-55.16587071
Produced by FastQC (version 0.11.5)