FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011888

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011888
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1738473
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCACAAG11150.00160237877.08768032
CCCGCAC12700.005978086.2516081
AAGATCT12750.0065563276.1962853
GGCTATT15200.0060190295.6982361
GTTCAAT18350.00139850975.5067421
GTTTCAA22205.035368E-45.2019931
Produced by FastQC (version 0.11.5)