FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011894

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011894
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences655406
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTCAG5450.001772980110.6324681
CCACAAT4900.00977302510.347671
CAACAAT7850.00377328028.3044991
CCCGGCT8100.00500469248.0481871
Produced by FastQC (version 0.11.5)