FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011897

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011897
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1308422
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTAAT7602.5761363E-49.5633711
GTTCTAT12808.078812E-46.8139021
ATCTATG12300.00420202186.46644836
CGCTTCT15200.0055697645.73802231
CTTTAAT16650.00244933235.67484051
CTCTGCC16900.00292332945.59089371
GGCAAAT19700.00312487065.16519071
Produced by FastQC (version 0.11.5)