FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011907

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011907
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1463310
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAA8250.0060598817.8799011
GTTCGAT8700.0097445997.47231961
CTCCCAT9800.00340746277.37065551
CTCCAAA16456.418588E-67.02564571
CTTTGGT14505.0105434E-46.4760111
CACGGAA14500.00353352215.9778561
CAACGAT15800.00141163655.9431741
CCTGAAT16450.00228437575.70833731
TGATCTG21002.348922E-45.4887554
CCTCCAC15850.009469125.4687011
CTGAAAT23251.6858778E-45.2815111
AAGATGC20700.00114421935.2202835
CAACAAT18600.0096919625.0485031
Produced by FastQC (version 0.11.5)