FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011916

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011916
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2161190
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAAAC4600.00625850210.9900171
CCTCAGG10356.8679143E-47.6755671
CTTAAAT18550.00159250895.4505741
CCTCGAC20308.53559E-45.33646151
CCCTGAT19000.00215348585.32148171
CCTCGGC33304.988615E-75.20505331
Produced by FastQC (version 0.11.5)