FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011958

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011958
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences708544
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCAAC8206.360972E-59.56071951
GTTCATT8200.0064627617.8224071
GTTTCTT12608.4246875E-46.7876961
CCGGAAG12400.0053063186.32241061
GAGCTCG2600.0097538135.963344675-79
CAAAAAA18900.0023714565.27931931
AGGGAGC3900.00404712845.05980875-79
Produced by FastQC (version 0.11.5)