FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011970

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011970
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences900086
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGATG6050.00441296039.5256784
CCCTGAA7250.00184586218.9870781
CATTCAG9803.839103E-58.8648041
CTTAAAA11553.0999145E-68.775261
CAAAGTT10500.00651543356.89484831
TGCGGTG11550.00225630366.86075649
ATTTGAT14150.00261853576.1395821
Produced by FastQC (version 0.11.5)