FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences887730
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGCGTG6900.00167703839.0822652
CCCGGAG8250.0080357777.63478571
GTTTATA8450.0099514947.45408061
CACAAAG8450.0099514947.45408061
GTTATAT9650.003986387.25238661
ATTCAAT11150.00211031346.90440231
CAAAGAT12250.005653886.28441521
Produced by FastQC (version 0.11.5)