FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011982

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011982
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences668812
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTAAT2000.00843976517.9236031
GGCCAAC3250.008863113.1755296
CTGAAAA17209.890055E-56.2524191
AAAAGTT12900.0078432386.0887832
Produced by FastQC (version 0.11.5)