FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences498392
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACGTT1850.00535676119.3913251
GGGTTTT2902.063078E-417.2680052
AGATGGT4400.004861552311.366346
CCCCTAC1250.00489430049.408008115-119
GTATTAT7900.00434969278.1738131
Produced by FastQC (version 0.11.5)