FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012001

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012001
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1504172
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCTAT9452.4828842E-48.4372211
CACAGCT10800.00103954277.3825681
CTTATTT19359.733014E-66.36805061
ATTTGCG14500.00350602555.9820736
GAAGTAA16954.9948087E-45.9703095
CTTTGAA22651.7593464E-55.76026961
CTTTTCG23002.249798E-55.67261361
CTCATCC18050.00655827255.22041131
CTTCCGT18350.007951415.13506361
Produced by FastQC (version 0.11.5)