FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012058

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012058
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1437223
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGTT6500.00753824378.9260311
GTGTGGA10650.0073535786.80976531
GTTCAAT12650.00545750146.3064351
GTTCCGC19205.868054E-56.0436671
GTAGAAA14800.00424412035.88032441
GTCTGCT15450.0068348465.6329321
GTTTTGA15600.00760390335.57876971
Produced by FastQC (version 0.11.5)