FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012067

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012067
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1266370
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTTAC17952.5980733E-56.39056251
CTTGCTT13150.00918867255.9972271
CCTTTAT19508.675258E-55.8825951
CAAAGAT21706.6670924E-55.61659051
CTTTGGA15350.0072221295.60475251
CTTTGAA21807.148177E-55.59082651
CTTAAAA15750.00958684555.46240951
ATCGGAA17150.00408795.434541
CTTCCAG22105.1897037E-45.1905251
CTTTCTC19800.0039469945.06928161
CTTCCGT18400.0093206335.0653461
AAAACCA18350.009394995.0618914
Produced by FastQC (version 0.11.5)