FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012104

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012104
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1059086
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT4102.0047039E-413.7808447
CTATTTA4704.198365E-513.5242879
CACGTCT4805.116303E-513.242539
AGAGCAC6204.3780914E-511.3919623
ACACGTC5752.7571106E-411.0546348
AGCACAC5400.002028865710.462745
GAGCACA6800.00128950969.348114
CAAACGA7650.00375706878.3094314
CTCGACG11804.3225757E-47.1970021
GATAAGG13050.00991085.95321947
TATTTTC28105.115222E-65.2779125
AACAATA17700.0070320485.18899632
Produced by FastQC (version 0.11.5)