FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences816350
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAAGAG4700.00764379810.6969328
CTTCGAT7853.889888E-49.1774371
CTTCACG8550.0085335667.58346181
CTTTTAC10750.0085731946.70166351
CTTTTAA14756.352811E-46.3495421
AATATTC18400.0015357785.46507175
AAATATT32401.7606908E-65.0988064
Produced by FastQC (version 0.11.5)