FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012135

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012135
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences600337
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT3307.0625235E-414.6908919
CACACGT2850.004532137414.5792197
ACACGTC3408.8540127E-414.2588068
GCACACG4454.7262307E-412.449676
AGCACAC4600.008535719510.538245
CTCCGAA5300.001939963710.5178541
GTCGAAG8150.00748509877.694811
Produced by FastQC (version 0.11.5)