FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences515695
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGGTTC1850.00516105119.5167549
CCCCTAC1900.005598529719.243891
TAAGCGA1900.00602095719.0031559
CCCATGG3909.733168E-515.0003641
ACACTTC3150.006653243713.7586673
TTCCACT5850.00326467639.8780176
ATAATAA12900.0069525326.1594038
Produced by FastQC (version 0.11.5)