FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012166

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012166
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences875808
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACATTA5850.00360445899.7619025
GGCTCAT6050.00470178259.4526851
CCCAAAG7150.00182506348.998231
ATTTCTG14100.0029405646.0762674
Produced by FastQC (version 0.11.5)