FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences984783
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTAGAA6951.5518488E-410.0563591
CTTTAAG6350.0084247038.8052531
AACTCTT7150.00233269768.7586752
CTCGGAA8400.009554057.4883961
CAACAAC13550.00239117546.18967061
CAGATTT14300.0046034745.8370413
Produced by FastQC (version 0.11.5)