FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences818341
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAA11051.6916601E-1011.4214131
GATATTA7202.1929966E-49.7167445
CTAAAAA5800.00389373569.6710051
CCAAGAT6000.00515017949.3486391
GAAATCT9152.5593934E-59.1751565
ATTTCCC9550.00361307527.3257136
CGAAAAC9850.00478013337.11825281
ATTTATT10250.00703288576.84046751
CTTTTTT21103.6860636E-45.31676151
CTGCAAA19000.0031110915.16635271
Produced by FastQC (version 0.11.5)