FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012223

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012223
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1248228
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAGG450.00990874747.9976651
GGTAAGG8500.0081506557.6231581
GAAGTAC12951.3918105E-47.1903895
CTTCAAA21901.7176117E-66.2462711
CACAGAA17306.8232353E-45.82630631
Produced by FastQC (version 0.11.5)