FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012229

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012229
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1882897
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTATTT17301.7201328E-67.11539171
GATCGGA10500.00651138566.89614961
GGTAGAT14304.109835E-46.5826881
AAGGGCA16850.00314525585.55682234
CTTCGAT17050.00339566735.52096461
GTCTGAT18500.00148870675.47964331
CTTCAAG26657.391236E-65.4341141
ACAAATC23251.7614916E-45.26634174
CTAAAAT19550.00297896565.18534041
AGATTAC18500.0094257575.06081066
CGTTTAT20100.00420966335.04345231
Produced by FastQC (version 0.11.5)