FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012232
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences512116
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTTCAC2851.820771E-417.552715
CTTCAGT4400.004705718711.4161841
TTGGGAT4600.00675560410.8750493
CCTCGAT5400.001773951710.6309441
CAAAAAA12305.912683E-47.00086551
Produced by FastQC (version 0.11.5)