FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences484615
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTAGA1100.00999682226.1826466
CCCAAAT3050.00517565214.2897031
CTTAAAT3609.507173E-414.1243131
CTTAAAA5500.001866878810.5657211
CTTTAAA5850.0031158659.9335821
CTTCAAA9753.3862868E-48.1952061
CTTCCAT8550.0079155897.6462451
CTTTTGT8550.0079155897.6462451
Produced by FastQC (version 0.11.5)