FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012267

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012267
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences874697
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCATAT7552.540204E-49.57593251
CCCGCCT6950.00127120989.3623691
CTCTCCC8609.3238166E-48.4067771
CTAAAAT8050.0048171898.0830381
CCCAAAT8350.00669077647.792631
CGAAGAT11300.00172396127.03788661
CTTTGAT14806.34261E-46.35052541
AAACAAC13100.0084458946.04586125
CTTCAAT17951.5859159E-46.041641
CCCGGAA13250.0091039196.00212241
CAAAAAC14750.0042262695.88189461
CAAGAAA20651.7509889E-45.60180431
CTTCAAA17800.0057303715.2802121
Produced by FastQC (version 0.11.5)