FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences556138
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTGCTA2900.0039803714.8665383
ACATTGC5850.00341537369.8245486
TCCAATC6350.00670496379.052592
CTTCATT10850.0011472357.31245331
CTTCCTT12250.00412230476.4767441
Produced by FastQC (version 0.11.5)