FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1064363
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG1650.0058890597.9058223110-114
GGTAAAT10150.0046577927.1376841
CTTCCAT19155.7304755E-56.05305431
Produced by FastQC (version 0.11.5)