FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012281

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012281
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455203
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCAGTC3300.00916980913.1065433
CTCCCGG4450.004834739511.3744091
AATTTAA6150.00501587249.3770395
CTTCAAA7950.00429072048.1858951
CAAAAAA12850.00660152976.1898531
Produced by FastQC (version 0.11.5)