FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1009504
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCGTG6200.00631123710.976054145
TCCAACG7250.00231611388.7656087
CTCCGCT8350.0079180877.64760071
CCTGCCT10250.00627168276.9222191
CGAAAAA17500.00585462855.2707751
TGTGAGC4100.00130843775.16871780-84
Produced by FastQC (version 0.11.5)