FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1104589
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT3951.2248447E-414.6037957
CACGTCT4502.2934004E-514.4212489
AGAGCAC5450.00184150210.5853613
GTTTACT5600.00221920410.3505571
GAGCACA7000.00139001049.2716424
CACAACG7350.00216725728.8301353
CCCACAA8500.00770055887.671591
GTCAAAC9750.00314426387.43116951
CACCGAT10300.00536738247.0343591
CTTTAAT13451.9255513E-47.00297981
CTTCCAC14103.4315084E-46.6801471
GTCAAGG13700.00180603956.34632731
CTTCAAA18101.7273818E-46.0044671
Produced by FastQC (version 0.11.5)