FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences443767
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT1850.00466483419.8600331
GACAGAT3750.001377073913.4476793
CCCTTTT4950.00946397210.3914121
CTTCAAT8305.558416E-48.8532691
TGAAAAT12509.54495E-68.0686073
CTTTTTG10200.0042439437.20412971
Produced by FastQC (version 0.11.5)