FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012318

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012318
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1143363
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT3001.1808845E-519.1865837
CACGTCT3650.001135725813.798579
ACACGTC3950.00205927512.7505778
CAAACCT7500.00259684568.6559191
CACGAAG8050.00491998168.0645211
GTTCAAT9950.00400395927.2495131
TTAATTC15151.2386685E-46.64939743
CTTTCGG13300.00135934746.50820971
AAAGTTT17000.00351803245.503962
CTTTTAA21200.00154370285.10372541
Produced by FastQC (version 0.11.5)