FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1017183
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGCTT7750.003663768.3325451
CGTCAAT9653.468943E-48.1790391
CGAGAAT8900.00141152328.0620771
CATGGAG12557.4671645E-46.8607951
CTTGAAG14254.3937145E-46.54584031
CAAACAA12500.00538414866.3142181
CTTTGAC12950.00777277866.09480571
AGATTTT18400.00164076945.4368854
ATTTTAT25301.274854E-45.08384046
Produced by FastQC (version 0.11.5)