FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012327

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012327
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1634814
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGTT11151.7052804E-47.80255561
CTTTAAT19551.1378455E-56.3042391
CTCAAAT12750.0059460166.25479361
CTTTAAA21658.468929E-66.02760931
CTATAAT16400.00210912185.7468521
CATTCAT20107.094725E-45.41035371
CTCCGTT18650.0095825075.0535321
Produced by FastQC (version 0.11.5)