FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012346

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012346
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences521532
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACAAGT1850.005034046719.601061
CCAAAAT7752.8219616E-510.2937191
AAAATAG8700.00107574548.2849325
ATTTAAA9000.00141532998.0582141
ATTTTAT15500.0070594885.61475561
AATATTT17000.00344712855.51191665
CTTTTTT18650.00160784555.44415471
Produced by FastQC (version 0.11.5)