FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012355

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012355
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2292222
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACTT10900.0090965826.6617271
CTTAAAT23057.655035E-86.61548571
CCCAAAT12700.0056177526.28931
CTTTTAG16352.9654393E-46.21761231
CTTCGGG20452.2244272E-56.0362741
ACTTTCG13300.0093246075.9891936
CCCGCAT15500.0069930065.62163831
CTGTAAC17450.00432092985.4095521
CTTCCGT26102.8794695E-55.28599171
CTCCAAT18300.00754873645.15828851
ATTTCGG25501.1247743E-45.1256121
Produced by FastQC (version 0.11.5)