FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012361

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012361
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1118411
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAA6600.0099608118.6270131
CCAATCC7800.00417792568.2122531
CTTGATT9603.5804094E-48.1552231
CTTTTGT14801.6453341E-67.6943631
CTTTGAC11400.00223404986.8675561
TTCTATT10350.0070027086.84399032
CCTTTAT14801.0530061E-46.7325681
CTTCGAT10700.009221316.65166851
CGAAAGA12350.0051676576.33928251
CTCGCCG13100.0095231615.9763471
CAACAAA18653.3106076E-45.72435861
GAAAGAT18050.00135401355.52033231
CTCCTTT15650.0096822815.45734361
Produced by FastQC (version 0.11.5)