FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012368

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012368
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences788798
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTAGCA4050.002351765512.5262951
CCCTTGA5600.002212999610.3533661
CTTCCAC12757.971366E-46.821041
ATATTTA18800.0018870645.37643534
TTGATTT21300.00162100225.0843563
TGATTTC18550.009429015.05968764
Produced by FastQC (version 0.11.5)