FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012374

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012374
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2571487
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT7500.00321533448.4548449
CCCGATT12206.6398474E-46.9328962
CCCACGG12000.0041800216.4702621
CTTAAGA18100.00156006315.45958851
TAACAAC17950.0085661945.10273849
Produced by FastQC (version 0.11.5)