FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012414

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012414
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences910716
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAGAG2003.2773562E-421.5745011
CTCTAAT2506.357893E-520.13621
CTACAAT6500.0080729968.8510771
GACGATT8050.0053257917.99339254
CTTCCAT16050.00179289565.82489161
AAAAGAT18652.8733574E-45.78404861
CTTCCGG20101.282856E-45.72457741
CTGCAAA20151.3295296E-45.71037241
CTTTCTT20600.00109592285.23652941
Produced by FastQC (version 0.11.5)