FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012421

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012421
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1121621
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAA5400.001728837310.6659381
CTCGGAA7803.6759002E-49.2301391
ACGGGCA10850.0096247976.6221764
TTGAATT17551.269386E-46.1410782
CTTTCAA21751.0195639E-55.9582141
GAAAACT14950.00526270885.7672733
Produced by FastQC (version 0.11.5)