FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012425

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012425
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1288558
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAGGCT8500.00766834667.67538171
GTTGTAT10400.00586838556.97016431
CTCCAAA12300.00409231246.48281961
CCGGAAT20903.181045E-55.8962921
ATGGATT16400.00221020125.7240522
AAACTTT15250.0062331695.67998174
CTTTTAT19153.697661E-45.67804531
Produced by FastQC (version 0.11.5)