FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1515662
Sequences flagged as poor quality0
Sequence length100-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATAGTG6750.0011579699.4593837
CTTCACT9500.0028872617.4966211
GTTTGAT14300.0035438415.9763281
CCCGCAT18452.83829E-45.7900741
CGATTTC25454.7040667E-65.57545854
CCGATTT17900.00126925875.5489833
GACAAAG17750.006925425.19617035
CCCGGAT19250.00301996465.1794841
Produced by FastQC (version 0.11.5)