FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012445

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012445
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences817486
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAT4653.1780583E-513.929721
CTCATGA4450.00501272811.3211581
CTCCATT10458.971643E-68.9532341
CTTCCGT8750.00115741048.2251681
CAACAGA8450.0077514227.66546731
CACAGAT8550.0088934647.54846863
CACAAAA13101.5101288E-47.1420831
ATCACAA10150.0049640537.09066251
CTCAAAA11300.00180848847.0059511
AATTTTG15452.2265087E-56.96217975
CTTCCAG13502.1855872E-46.93046571
CAACAAT10800.009053246.66390941
TATGATT13100.00121924646.5705042
GTTTCAT12150.00387649356.51582241
CAAAGAT13700.00194571856.30396131
TATCGCG3508.322709E-45.73718790-94
CAAAAAC15800.0095049645.4660931
Produced by FastQC (version 0.11.5)